Are there any other compounds isolated from dermacoccus spp. To our knowledge, this is the first reported case of dermacoccus infection in humans. Our first job is to listen to and observe what our customers need, and meet those needs with quality products and services. We present here the draft genome sequences of dermacoccus nishinomiyaensis strains ucdkpl2534 and ucdkpl2528, which were isolated at an indoor track facility in medford, ma, usa 42. Ivteam deliver regular updates which are available through email, rss, twitter and other social media outlets. The species dermacoccus nishinomiyaensis was originally described and validly published by stackebrandt et al. Kytococcus sedentarius is a marine dwelling gram positive bacterium in the genus kytococcus. The fermentation process using complex media led to the production of three new pigmented heteroaromatic oxidized and reduced phenazine compounds, dermacozines hj. He was first treated empirically with cefazolin and ceftazidime. Help pages, faqs, uniprotkb manual, documents, news archive and biocuration projects. Here, we describe a case of pneumonia and bacteremia due to kytococcus schroeteri in an immunocompromised patient, successfully treated with linezolid and trimethoprimsulfamethoxazole.
Pdf dermacoccus barathri sp nov and dermacoccus profundi. It is strictly aerobic and can only grow when amino acids are provided. The authors herein report a persistent dermacoccus nishinomiyaensis catheter related bacteremia in a 1yearold boy with severe hirschsprungs disease. The vitek 2 idgpc card ambiguously identified several isolates as kocuria varians or kocuria rosea or as dermacoccus nishinomiyaensis or micrococcus luteus, with probabilities of 50.
Successful treatment of peritoneal dialysisrelated peritonitis caused. We isolated dermacoccus nishinomiyaensis ucdkpl2534 from a metal door handle. Annotation of the kytococcus sedentarius genome from dna coordinates 500258 to 504432 annie leach, nyaiyah white, christian mika, persephone louissaint, armani rhim, jodi cook rochester city school district, rochester stem, academy of health sciences thank you to dr. Ivteam provide the largest free global online intravenous resource for infusion and vascular access practitioners. Snomed ct browser uk snomed ct clinical edition nhs data migration april 2020. Virtualunknowntm microbiology internet edition 2012. Draft genome sequences of dermacoccus nishinomiyaensis strains. Dermacoccus nishinomiyaensis is a common bacterial resident of the human skin microbiome, among other environments. A 53yearold man receiving peritoneal dialysis pd for 4 months presented with pdrelated peritonitis abdominal pain, turbid peritoneal dialysate effluent, white blood cell in peritoneal dialysate effluent 5350l, creactive protein 25. Kocur, schleifer and kloos 1975, 291 micrococcus nishinomiyaensis oda 1935, 1202. Itis taxonomy is based on the latest scientific consensus available, and is provided as a general reference source for interested parties.
Recently, chng and colleagues suggested that dermacoccus spp. This pathwaygenome database pgdb was generated by the pathologic program karp10, dale10, caspi14 using pathway tools software version 19. Atcc stands ready to support our customers needs during the coronavirus pandemic. Pdf the environmental isolate kytococcus sedentarius tr2 was found to be a new producer of the. The organism had chemical and phenotypic properties consistent with its. The isolates had chemical and phenotypic properties typical of members of the genus dermacoccus and could be distinguished sharply from one another and from the type strains of dermacoccus abyssi and dermacoccus nishinomiyaensis using dnadna relatedness data. Screening of the microbial community of sewage sludge of beni. Kocuria rhizophila adds to the emerging spectrum of micrococcal.
Chapter 14 staphylococcus, micrococcus, and similar organisms objectives 1. Micrococcal species kocuria, nesterenkonia, kytococcus, dermacoccus, and micrococcus are most commonly found on the exposed skin of the face, hands and legs, and are usually not. The genome assemblies contain 3,088,111 bp in 58 contigs and 3,162,381 bp in 100 contigs. Dermacoccus with respect to their chemical structure, biologi cal activity. Skin commensals are the most frequently reported causes of indwelling central venous catheter cvc infection due to colonization of the catheter by the patients own skin flora 1. Summary of dermacoccus nishinomiyaensis, version 23. Authors of over 50 institutions that have signed a publish and read agreement with the society are now eligible for fee free. This free premier service from ivteam provides intravenous updates without any subscriber or financial related restrictions. It is known for the production of polyketide antibiotics as well as for its role as an opportunistic pathogen. Pdf dermacoccus barathri sp nov and dermacoccus profundi sp. The names proposed for these taxa are dermacoccus barathri sp.
Dermacoccus definition of dermacoccus by medical dictionary. Jul 20, 2009 it is strictly aerobic and can only grow when several amino acids are provided in the medium. This biocyc tier 3 pgdb was computationally generated. Pdf draft genome sequences of dermacoccus nishinomiyaensis. The taxonomic status of an actinobacterial strain isolated from mariana trench sediment was determined using a polyphasic taxonomic approach. Dermacoccus nishinomiyaensis this gram positive coccus is found in tetrads, irregular clusters, and cubical packets of eight. Dermacoccus is a grampositive, nonsporeforming, chemoorganotrophic and aerobic genus. Pdf microbialderived natural products have functional and. Dermacoccus nishinomiyaensis oda 1935 stackebrandt, koch, gvozdiak and schumann 1995, 689 vp emend.
Bacteriaactinobacteriaactinobacteriaactinomycetalesdermacoccaceae dermacoccus dermacoccus nishinomiyaensis. Dermacoccus nishinomiyaensis global catalogue of microorganisms. Page designed through the cooperative efforts of interagency itis teams. Kytococcus schroeteri, a saprophyte of the human skin, may cause serious infections in the immunocompromised host. Describe the general characteristics of staphylococcus spp.
Dermacoccus nishinomiyaensis a and b agar plates medium 5006, 5265, 5425, 5428 and 5530 compendium of actinobacteria from dr. Kytococcus sedentarius, dermacoccus nishinomiyaensis, streptomyces cinnamonensis, monensins. From webinars to whitepapers and customized iaqieq training programs we offer a variety of ways to for iaq and microbiology pros to stay current in the industry. The culture collections hold cell cultures, bacteria, fungi and virus strains from worldwide sources. Kytococcus sedentarius is known for the production of oligoketide antibiotics. Staphylococcus, micrococcus, and similar organisms. The genome assemblies contain 3,088,111 bp in 58 contigs and 3,162,381 bp in 100 contigs, respectively. Ward and koki horikoshi and alan t bull and michael goodfellow. Hosted by the usgs core science analytics and synthesis.
Text is available under the creative commons attributionsharealike license. It is catalase positive, oxidase positive, and exhibits strictly aerobic metabolism. Catheterrelated blood stream infection caused by dermacoccus. Micrococcus occurs in a wide range of environments, including water, dust, and soil. Dermacoccus nishinomiyaensis micrococcus nishinomiyaensis edlab an aerobic, grampositive or gramvariable coccus occurring in pairs, tetrads groups of four or irregular clusters of tetrads with bright orange colonies. Dermacoccus nishinomiyaensis as a cause of persistent. Dermacoccus is a grampositive, nonsporeforming, chemoorganotrophic and aerobic genus of bacteria from the family of dermacoccaceae. Ncbi taxonomy catalogue of life col species database global biodiversity information. View enhanced pdf access article on wiley online library html view download pdf for offline viewing. Dermacoccus nishinomiyaensis or kytococcus sedentarius finding.
Kocuria rhizophila journal of clinical microbiology asm. Kytococcus sedentarius zobell and upham 1944 stackebrandt et al. Dermacoccus nishinomiyaensis 59 type strain dsm 20448. It is found in tetrads, irregular clusters, and cubical packets of eight. Here we describe the features of this organism, together with the complete genome sequence, and annotation. Dermacoccus nishinomiyaensis oda stakebrandt et al. The strain described in this report is a free living, nonmotile, grampositive bacterium, originally isolated from a marine environment. The majority of strains are nonpathogenic for humans. Draft genome sequence of dermacoccus nishinomiyaensis. We isolated dermacoccus nishinomiyaensis ucdkpl2534 from a metal door handle and dermacoccus. Annotation of the kytococcus sedentarius genome from dna. Dermacoccus nishinomiyaensis or kytococcus sedentarius hide descriptions. Dermacoccus nishinomiyaensis micrococcus nishinomiyaensis.
Edlab is a leader in indoor air quality training and offers a variety of customized iaq training programs. Note that the displayed test results represent raw data and therefore may deviate. Mar 24, 2019 this free premier service from ivteam provides intravenous updates without any subscriber or financial related restrictions. Kocuria rhizophila adds to the emerging spectrum of.
Draft genome sequences of dermacoccus nishinomiyaensis strains ucdkpl2534 and ucdkpl2528 isolated from an indoor track facility brian a. Pneumonia and bacteremia due to kytococcus schroeteri. Genus dermacoccus are one form of actinomycetes isolated from human skin and water, but human infection with dermacoccus spp. Dermacoccus nishinomiyaensis oda 1935 stackebrandt, koch. Successful treatment of peritoneal dialysisrelated. We describe a case of a 4yearold boy with congenital heart disease who was diagnosed with a brain abscess. Micrococci have grampositive spherical cells ranging from about 0. Draft genome sequences of dermacoccus nishinomiyaensis. Ncbi taxonomy catalogue of life col species database global biodiversity information facility gbif biodiversity database global catalogue of microorganisms. Describe the chemical principle of the media used for the isolation and differentiation of. Extensive use was made of 1d and 2d nmr experiments and highresolution ms to. Virtualunknown tm microbiology is designed as a flight simulator for the microbiology lab. Dermacoccus nishinomiyaensis micrococcus nishinomiyaensis an aerobic, grampositive or gramvariable coccus occurring in pairs, tetrads groups of four or irregular clusters of tetrads with bright orange colonies. Pdf are there any other compounds isolated from dermacoccus.
Micrococcus is a very heterogeneous genus, and has recently been divided into five new genera, namely micrococcus, kocuria, dermacoccus, nesterenkonia, and kytococcus, based on phylogenetic analysis of the 16s rrna gene and differences in chemotaxonomic properties. While every effort has been made to provide the most reliable and uptodate information available, ultimate legal requirements with respect to species are contained in. Dermacoccus barathri global catalogue of microorganisms. Kytococcus sedentarius formerly micrococcus sedentarius.
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